rs107743902 SNP Detail

Summary

• ID
  rs107743902
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:57410194 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATGT AGCCCAGGCT GGTTTTTGAA
  T
  TCCAACCTTC AAACTTCAGC TTCCT                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss145810020	ENSMUSSNP2137425	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss325427546	CHEV_17_57242617	CHEVERUD	SCREENING_POP	f	SNP		T	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs107743902					SNP	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:57410194 () rs orientation: forward

Symbol	Name	Function Class
Cpgi9396	CpG island 9396	1998 bp proximal
Gm11110	predicted gene 11110	within coordinates
Rr529279	regulatory region 529279	1982 bp distal
Rr529280	regulatory region 529280	1641 bp proximal