rs107745557 SNP Detail

Summary

• ID
  rs107745557
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:177992455 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      T AAGATCATGG CCAGTACCTT TACCGGTACA TTCCAATTCT
  TCTACCTAGC CTTTGTTTTT TGCAAAGGAA TGTTTTTTGG ATGTGCCTTA TGCACGACAA
  A
  CTCCTCAAGA GCCACGGGTG TATAAGAGTA CTAGTTTTCA TTTAAATTAT ACATTATGCT
  TTGTGCATAA TGTGGATAAA CCTTTTACAC CCTGTATATT T                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss136943669	ENSMUSSNP5043617	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs107745557					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:177992455 () rs orientation: reverse

Symbol	Name	Function Class
Catspere2	cation channel sperm associated auxiliary subunit epsilon 2	within coordinates
Gm69636	predicted gene, 69636	within coordinates