rs107747848 SNP Detail

Summary

• ID
  rs107747848
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:72887188 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAACCATGG CTGTCCTGGA
  ATTCACTCTT TAGACCAGGT TGGTCTCTAA CTCACAGAGA TCCACCTGCC TCTGCCTCTC
  AAGTGCTTGG ATTAAAGGCA TGTGCCAGCA TCTCCTGGCT TCACGTAGTT TTTTATTAGG
  ACTTTGTGGT CTTGTGTTTC TGGATGGCTG GGGTGGGGCT AAGACGCCTT GACTTTTAGA
  R
  CATGCTGGTA CTTGTCCCCC TGGTCTCAGA CTGACCACAC AACCCTTCCC TGGAGAGACA
  TTTGTCAGCT AGGCTGAGAC TGGGAACTAG GGGCTGCTTT GAGTGTTTGT GTGCACACAG
  TTGGCTCTAT GAGAGTGATT CTCAATGGCA GGTGGCTGCC TGCCTTGCAG TCCCTTGCCA
  GCTGTGCCCC AGCCCAGGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss144663581	ENSMUSSNP4275252	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs107747848					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:72887188 () rs orientation: forward

Symbol	Name	Function Class
Igfbp2	insulin-like growth factor binding protein 2	within coordinates
Tssr7321	transcription start site region 7321	1050 bp upstream
Tssr7322	transcription start site region 7322	1079 bp upstream
Tssr7323	transcription start site region 7323	1122 bp upstream
Tssr7324	transcription start site region 7324	1171 bp upstream
Tssr7325	transcription start site region 7325	1186 bp upstream
Tssr7326	transcription start site region 7326	1216 bp upstream
Tssr7327	transcription start site region 7327	1245 bp upstream
Tssr7328	transcription start site region 7328	1548 bp upstream
Tssr7329	transcription start site region 7329	1583 bp upstream
Tssr7330	transcription start site region 7330	1597 bp upstream
Tssr12178	transcription start site region 12178	1086 bp downstream
Tssr12179	transcription start site region 12179	1129 bp downstream
Tssr12180	transcription start site region 12180	1193 bp downstream
Tssr12181	transcription start site region 12181	1214 bp downstream
Tssr12182	transcription start site region 12182	1257 bp downstream
Tssr12183	transcription start site region 12183	1278 bp downstream