rs107749626 SNP Detail

Summary

• ID
  rs107749626
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:52282736 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGCCAGGTA ACTGTTGGGC
  AGAGCCTAGA AGGAATGCCA ACAATGAGTC TTGTATCTCC TTGAGTCTTT CACAGTTTCT
  TAGGCAATGC AATCCTCCAA CCAGGGGTGA GTATTCGCCA TCACTGAAGA CCATTTCCTG
  ACCCCTTTAC CCACTGCCCT CTGACTGAGT TTTCCCAGTT ACAGTTGCAG CAATTACAAC
  R
  CCACAGCATT ACTCTTATCT CCCCGTGTGC ATTAAACACT CCTTCCTCTG GTTTTTGTCT
  GTTTGGTTTC TGTTTGCTTT ACAGTAACAA GAGCCATATG CACGACTAAA GTCATGGGAC
  TCACAGAATG CACAGAAAAC CTGCTCCTCG TTCTTTAGTT CCATCTCAGA CATCCCACTG
  TGCACCAGGA GAGGGAGCCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss139499937	ENSMUSSNP4484710	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss324626887	CHEV_14_52664954	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs107749626					SNP	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:52282736 () rs orientation: forward

Symbol	Name	Function Class
Rr389655	regulatory region 389655	448 bp upstream
Rr491869	regulatory region 491869	within coordinates
Rr491870	regulatory region 491870	181 bp proximal