rs107754223 SNP Detail

Summary

• ID
  rs107754223
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:5465191 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTAGTTTATT TACTTTTGGT
  AAGAGACAGA AAAAGCATAT TTTTTCACAT TATACATTTT TGTATTCAAA ATGTAAGTGT
  GGTATGTCCC CCAATCTCTC ATGCCAACTG TGATGGCTGG TTTTACTTGC CACTTTGACA
  GATTCTGGAA TTATCAGAGG ATGGGCCTGT AAGTATGCTA TGAAGGATTA TCTTGATTAT
  S
  GTAATTGCTA TGGGAAGACC CATCTTAACT CTGGGCAGAA CCACTCCCCT GGCAGGGGTT
  CTTGGATTCT ATGCAAGTGA TGAGACTGTG AAGATCACTA GCATGCATTT GTCTGTTTCT
  TAGCTGGGGA CACAATGTGA CCAGGTAATT CAAGCTTCCC ATTGCTGTGA CTTCCCTACT
  GTGATGAATT ATACCCTTGA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss148484744	ENSMUSSNP6890615	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs107754223					SNP	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:5465191 () rs orientation: forward

Symbol	Name	Function Class
Rr370762	regulatory region 370762	1196 bp upstream