rs107760580 SNP Detail

Summary

• ID
  rs107760580
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:28022052 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACAAAGCAG AGGGTAAAAC
  CTTAATTTCA CAGCAGGAGT GGTGGTGCAC ACCTATAATT CAAGGAGGAT CAATGAATTG
  GAGGTCAGCC TGAGCTAATT ACGAGATACC TTCTCTTAAA AACCTGTCAC TGAGCCAGGC
  AGTGGTGGGA GGCAGAGGCA GGCAGATTTC TGAGTTCAAG GCCTACAAAG TGAGTTCCAG
  R
  GACAGCTAGG GCTACACAGA GAAACCCCCA TCTCGAAAAA CAAAAAACAA ACAAAAAGAA
  TCTGTTGCCA TTTACTCCAA AAGGAGAATT AACTGTACCT TTAGAGAATG CTAGTTTTAC
  CATAAATTGA CGAGGTACAG TCATTTGAGG GGAGGGGAAC TCAACTGAGA AAATGCCTCT
  ATAGAACTGG ACTGTGGGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325349720	CHEV_17_27940023	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs107760580					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:28022052 () rs orientation: forward

Symbol	Name	Function Class
Ilrun	inflammation and lipid regulator with UBA-like and NBR1-like domains	within coordinates
Rr330150	regulatory region 330150	1252 bp distal
Rr330151	regulatory region 330151	749 bp proximal
Rr392473	regulatory region 392473	1853 bp downstream