rs107767697 SNP Detail

Summary

• ID
  rs107767697
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:11687083 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C GAGACAGGGT TTCACTGTGT AGCCCAGCCT GGTCTACTCA
  CTCTGTAGAC CAGGCTGGCC TTGAACTCAG AAATCCTCCT GCTTCTGCTG GGATTAAAGG
  C
  GAGCACCACC ACCTCCTGGC TATAAAATTT GAAAATCATA CTGAGCCATT AAGGAGTAGA
  CACTATTCAT GGAAGTTTTA CTTTTTTTTT TTTTTTTTTT T                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss148671296	ENSMUSSNP6306890	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs107767697					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:11687083 () rs orientation: forward

Symbol	Name	Function Class
Ankrd10	ankyrin repeat domain 10	1326 bp upstream
Cpgi20087	CpG island 20087	416 bp distal
Gm45592	predicted gene 45592	199 bp upstream
Gm64331	predicted gene, 64331	within coordinates
Mir7238	microRNA 7238	1347 bp upstream
Rr186041	regulatory region 186041	82 bp distal
Rr400761	regulatory region 400761	1065 bp downstream
Tssr80391	transcription start site region 80391	1438 bp upstream
Tssr80392	transcription start site region 80392	1360 bp upstream
Tssr80393	transcription start site region 80393	1340 bp upstream
Tssr80394	transcription start site region 80394	1318 bp upstream