rs107769286 SNP Detail

Summary

• ID
  rs107769286
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:61649270 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TATGTGTAGC CTGTGGTGTC TAGCAGAGGT ATTGCCATTC
  TATCATAGGG TTAATCCACT GAAATTATTT TTATATATGT ATATATTTAT ATTTTAGGAA
  R
  CTTGAGTCCC AGGTCTTAAT ATGATTCTTT TAAAAGGTTT TAGTGAAAGG CTAAACATAA
  AATCACAAAA TTCTAAGTAT GAGTGCTATA TCTTTTGTA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss137815008	ENSMUSSNP1345920	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs107769286					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:61649270 () rs orientation: forward

Symbol	Name	Function Class
Lrfn5	leucine rich repeat and fibronectin type III domain containing 5	within coordinates
Tssr113582	transcription start site region 113582	1396 bp upstream