rs107772819 SNP Detail

Summary

• ID
  rs107772819
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:58993668 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C AAGGTGGCAT GTGAGATGAC TGCAAAACAC CAGAAAAGAC
  ATTGTCATGA GCAAGGGGCG ATCCTTGCAG AAATGCCCAA GGTTCCATTG TGGGACTAGG
  K
  GCTTGTTGGC ATGCAGTGTT TGCCAACCAA TGTGCACCCT AGATGTCCAC ATTTCCTCTC
  ATGGGAAACA GGGCAAGGGC ATCTGAGGAC TTCAGGGAAG T                    
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss144667239	ENSMUSSNP3878486	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs107772819					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:58993668 () rs orientation: forward

Symbol	Name	Function Class
Del(7Ube3a-Snrpn)1Alb	Deletion, Chr 7, Beaudet 1	within coordinates
Gm24966	predicted gene, 24966	153 bp downstream
Gm25499	predicted gene, 25499	1626 bp upstream
Snhg14	small nucleolar RNA host gene 14	within coordinates