rs107774922 SNP Detail

Summary

• ID
  rs107774922
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:88863423 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T GGCACCCTGG CAATTACAGC AACAATTTCT TTGTGCACAT
  TGCAAAAAAG GCTCAGCCCA GAGTACTTGG GAAACAAAAC AAAACAAAAC AAAAAACCAA
  C
  CCCCCCCCCC CCAGCTCCTT TGAACAGCAG AACCCCACGC AGCCTAGGCT CAGCCACTGG
  TTTCTAATCA GGGATGGTTG GTTATCTTAG CTTGTCAACC A                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss148329553	ENSMUSSNP3418971	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs107774922					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:88863423 () rs orientation: forward

Symbol	Name	Function Class
Gm8702	predicted gene 8702	801 bp downstream
Mlc1	megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human)	231 bp upstream
Rr507763	regulatory region 507763	224 bp distal
Rr507764	regulatory region 507764	within coordinates
Tssr135826	transcription start site region 135826	1361 bp upstream
Tssr135827	transcription start site region 135827	1271 bp upstream
Tssr135828	transcription start site region 135828	656 bp upstream
Tssr135829	transcription start site region 135829	623 bp upstream
Tssr135830	transcription start site region 135830	411 bp upstream
Tssr135831	transcription start site region 135831	228 bp upstream
Tssr135832	transcription start site region 135832	1204 bp downstream