rs107784921 SNP Detail

Summary

• ID
  rs107784921
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:28046794 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATACTTATAT ATTCCTAAGT
  ACAATCTAGC CTGTGTACTC GTGCGTATGA CTTGGTGTTG TGCTTCTCCC AGGGGAGATC
  GCTTCTGCTA GGAGTCCCTT GCCTTTATTC TTTGTGTAGG GCTGGGGCCT TGTGGGCTTT
  CGGGCATCCT GTTAGCATGA CAATTGTCCT TGTTGGGCTC CTGTGCAGGC AGCCATGTTG
  S
  TGAGACTTTA TTGCTATGGC TTCTGACGTT CCTAGGAGAA ACAGTCTCAC AACAAACTCT
  CTGTTCTTCT GGCTTTAAAC AATCTTTCTG GCTCCTCTTT CATAGTATCC CGGAACCTTT
  GGGCCACCAT GCCTGGCTAA TAAGACACTC TTGTTTAGTT TTTGAGACAG GGTCTATGTG
  GTCCTGGCTA TTCTGTGATG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325349860	CHEV_17_27964765	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs107784921					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:28046794 () rs orientation: forward

Symbol	Name	Function Class
Gm65125	predicted gene, 65125	574 bp upstream
Rr405125	regulatory region 405125	1317 bp downstream
Rr405126	regulatory region 405126	262 bp downstream
Tssr147072	transcription start site region 147072	1776 bp upstream
Tssr147073	transcription start site region 147073	862 bp upstream