rs107785778 SNP Detail

Summary

• ID
  rs107785778
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:6410809 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAAATAAAAA GGCAAACTAC TGATATCTAT GATATTGTGC
  TGAGAGAAAA AGCTAAATGA AGAATACCCA TATTCATTCA ACAGTAAAAA AAAAAACAAA
  M
  AAAAAAAACA AAAAACAACA ACAACAAAAA AACCAAACCA TACCTATAGG AACAAAGCCA
  TACTGGATGC AAGAAGCACA CGAAAACTTC TAGAATGAT                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145085462	ENSMUSSNP4485979	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs107785778					SNP	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:6410809 () rs orientation: forward

Symbol	Name	Function Class
Gm2792	predicted gene 2792	1738 bp upstream
Gm29719	predicted gene, 29719	within coordinates
Gm65955	predicted gene, 65955	within coordinates