rs107788011 SNP Detail

Summary

• ID
  rs107788011
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:92897792 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A CAGAGACAGT TGGTGAGGAG CTCCAAAGGT CACGGGCTCA
  GAGGGCTTTT TCTCTTGATG GCAGCCCGCG CTGTGCTTGT AAATTCTTCG GAGAGCTTTC
  M
  CAGAAAAAAA AAAAAAAAAA AGCAAAATTG TGTCCGTTCT GCCCCTCTTT TATCCCTGAT
  TAAATGGTAG AGGATATTTA AAGCACTGTG TTGGATGTAT A                    
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss148376496	ENSMUSSNP4038370	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs107788011					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:92897792 () rs orientation: forward

Symbol	Name	Function Class
Gm30085	predicted gene, 30085	1607 bp upstream
Gm62083	predicted gene, 62083	1221 bp downstream
Rr391110	regulatory region 391110	1148 bp upstream
Rr508114	regulatory region 508114	1605 bp proximal
Rr508115	regulatory region 508115	1988 bp proximal