rs107801701 SNP Detail

Summary

• ID
  rs107801701
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:45352160 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T GGCTGCCCCC TTGTACCCCC TGACCAAAGA AAGTAGAGAA
  TTCAGATGGA CATCAAAATA TCAGAGAGCC TTTGAAAATA TTAAAGAGGC TCTGTTGACT
  S
  TGCCAGCCTT GGCATTGCCA GATCTAACCA AACCCTTCAT CCTCTATGTT AATGAGAGGA
  CAGGGTGGCC AGAGGAGTTC TTACTCAGGC TCTAGGGCCA T                    
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss147048621	ENSMUSSNP5157639	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs107801701					SNP	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:45352160 () rs orientation: forward

Symbol	Name	Function Class
Rr393647	regulatory region 393647	893 bp upstream