rs107812526 SNP Detail

Summary

• ID
  rs107812526
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:171181307 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCAGC ACTTGGGAGG CAGAGGCAGG
  Y
  AGATTTATTG AGTTCAAGGC CAGCC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J	LG/J	SM/J
ss119999709	PARCsnp_1.02123	PARC_SEQ	INBRED	f	SNP	C	T
ss320118194	CHEV_1_173283870	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J	LG/J	SM/J
rs107812526					SNP	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:171181307 () rs orientation: forward

Symbol	Name	Function Class
Gm37154	predicted gene, 37154	387 bp upstream
Pfdn2	prefoldin 2	Intron
Rr423296	regulatory region 423296	1802 bp proximal