rs107815532 SNP Detail

Summary

• ID
  rs107815532
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:171181666 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGGATCTGA TGCCTTCTTC
  TAGCCTCTTT GGGTCCCAGG CATGCACATA GCAGACCTAT ACATACAGGT AAGTCACATA
  AAAATAAATC TTGGGGGGGA AATCTTTATA AAAATAAGTT TTTGAAAGAT CTCGTATGTG
  TAAATAATAA GAATATAAAG AGCTCTATGT AGTAATACGA AGTGATGTTG ATTTAGAAAT
  K
  AATTTAATTA ATTTCTAAAT CAACATCCTT CGTATTATTA ATTAATTAAT TAATTAATTT
  AATTAAATGG GGCTATTTCA GAGGGGAACT TTACATACAC TATGATTTAA TAGGGTAAAG
  AGACTCTCAA CATTGACTAG TCTATCCCTG TTTACATGAG ACTATTGAGG TTTGGTCTGT
  TGCTGTGTAT TGCAATGCTT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J
ss119999713	PARCsnp_1.02125	PARC_SEQ	INBRED	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J
rs107815532					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:171181666 () rs orientation: forward

Symbol	Name	Function Class
Gm37154	predicted gene, 37154	28 bp upstream
Pfdn2	prefoldin 2	within coordinates