rs107816505 SNP Detail

Summary

• ID
  rs107816505
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:25673892 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCAA ACCTTGATCC AGGACATGGG
  R
  CAAGGACTTT GAGAGTCTGT GAGTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325337989	CHEV_17_25591863	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs107816505					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:25673892 () rs orientation: forward

Symbol	Name	Function Class
Gm63608	predicted gene, 63608	within coordinates
Rr523577	regulatory region 523577	1736 bp proximal
Tekt4	tektin 4	within coordinates
Tssr143159	transcription start site region 143159	1176 bp downstream
Tssr143160	transcription start site region 143160	365 bp downstream