rs107818608 SNP Detail

Summary

• ID
  rs107818608
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:54243415 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGAA ACAGTACACA GCTCTTTCCG
  M
  TTAAAGCACC CACCGCTCCA TCATG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss132138633	ENSMUSSNP3939068	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
ss323673801	CHEV_11_54166091	CHEVERUD	SCREENING_POP	f	SNP			C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs107818608					SNP	C	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:54243415 () rs orientation: forward

Symbol	Name	Function Class
Acsl6	acyl-CoA synthetase long-chain family member 6	within coordinates
Gm12224	predicted gene 12224	within coordinates
Rr234591	regulatory region 234591	1986 bp proximal
Rr246748	regulatory region 246748	585 bp proximal
Tssr107987	transcription start site region 107987	658 bp downstream
Tssr107988	transcription start site region 107988	697 bp downstream
Tssr107989	transcription start site region 107989	869 bp downstream