rs107822410 SNP Detail

Summary

• ID
  rs107822410
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:32903661 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCTGCTTCA GAGCAGCATT
  TGAATTTTGC CTGACTGTGT AGCTGGTAGG CAGAGGCATC CTGGACCTCC CAGTTTTGTG
  CCATGAAAGG CTACATGCAG GTCTCAGACC CCATGAGAGA AGTTTCTTTG TGCAGTGAGC
  AGAACTTGTC TCTAAGTGAA ACTATACCAC GCCCACATGG GCCCCACAAG ATTCAAGGAT
  Y
  TTTGTGGAAG TTGGAGCGAA ATGACTGTAA GAGCCAGAAG TCTAGAAGAA TAGGACCAAA
  CAATGCCTTC TGGGTATGGT AGGACCTCTG CTCTAGTGAG CTCACAGACG CTGCAGTGAA
  CCCAAGATAA CACCAAGCTC AAGATAACCA ACATTCCAGC ACTGGGGAAG GGATGGTGAG
  CCCTAGCCCC TAGTTGAGGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325362837	CHEV_17_32821632	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs107822410					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:32903661 () rs orientation: forward

Symbol	Name	Function Class
Cyp4f15	cytochrome P450, family 4, subfamily f, polypeptide 15	944 bp upstream
Rr339615	regulatory region 339615	939 bp proximal
Tssr143733	transcription start site region 143733	898 bp upstream
Tssr143734	transcription start site region 143734	923 bp upstream
Tssr143735	transcription start site region 143735	952 bp upstream
Tssr143736	transcription start site region 143736	968 bp upstream
Tssr143737	transcription start site region 143737	1406 bp upstream