rs107830385 SNP Detail

Summary

• ID
  rs107830385
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:22791603 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C ATAAGTGGGG ACCACATGGA GCAAATTTAT GAAAGTAACT
  GAATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATGT ATATGTATAT
  R
  TGTGTGTGTG TGTGTGTGTG TATGTATGTG TGTGTGTGTG TGTATGTGTG TGTGTGTGTG
  TGTGTATTCA GTTACTATCA GTAGTCTCTA TGGCCATTTA C                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145309977	ENSMUSSNP1227749	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs107830385					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:22791603 () rs orientation: forward

Symbol	Name	Function Class
Rr392416	regulatory region 392416	468 bp upstream
Vmn2r111	vomeronasal 2, receptor 111	within coordinates