rs107832027 SNP Detail

Summary

• ID
  rs107832027
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:4229626 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCCC AGGAATATTT AGGTATAGAA
  A
  GTTGGAGCAT GTCGTAAGAT AGACA                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss139175486	ENSMUSSNP934494	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs107832027					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:4229626 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6187	CpG island 6187	497 bp proximal
Gm62505	predicted gene, 62505	within coordinates
Nr1d2	nuclear receptor subfamily 1, group D, member 2	943 bp upstream
Rr487195	regulatory region 487195	453 bp proximal
Rr487196	regulatory region 487196	830 bp proximal
Rr487197	regulatory region 487197	954 bp proximal
Rr487198	regulatory region 487198	1535 bp proximal
Rr487199	regulatory region 487199	1941 bp proximal
Tssr127524	transcription start site region 127524	1034 bp upstream
Tssr127525	transcription start site region 127525	972 bp upstream