rs107834572 SNP Detail

Summary

• ID
  rs107834572
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:120105939 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        CCATG TCTAACCCAC ATGAAGGTAC
  Y
  AAGCCTACCT GAAGCTTTGG GGGAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss136155380	ENSMUSSNP709742	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs107834572					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:120105939 () rs orientation: reverse

Symbol	Name	Function Class
Ccl28	C-C motif chemokine ligand 28	within coordinates
Gm60502	predicted gene, 60502	within coordinates
Rr270689	regulatory region 270689	1539 bp distal
Rr282567	regulatory region 282567	1939 bp distal