rs107858663 SNP Detail

Summary

• ID
  rs107858663
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:16456995 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G GGAACCCAGA ATCTACTGGA AGGGCAGCTT GGGAGATAGG
  GAGTTAGCTA CCTGCTGACA ACTACACACA CACACACACA CACACACACA CACACACACA
  C
  ACACATGCTC ACGCGCACAC ATACACATGC ACACTGTAAG CCCCTAGACA CCCCCAGCCC
  TGCAATTCAT TCATTCATTC ATTCATTCAT TCATTCTTCC A                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss148394964	ENSMUSSNP4897483	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs107858663					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:16456995 () rs orientation: forward

Symbol	Name	Function Class
Ceacam9	CEA cell adhesion molecule 9	Intron
Cpgi18385	CpG island 18385	619 bp proximal
Tssr64618	transcription start site region 64618	1111 bp downstream