rs107863296 SNP Detail

Summary

• ID
  rs107863296
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:101438421 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTTT CCTTTTCTTT TCTTTTCTTT
  Y
  CTTTTCTTTA TCAAGTGGTT TATTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss146736147	ENSMUSSNP5855489	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss324798526	CHEV_14_101600202	CHEVERUD	SCREENING_POP	f	SNP		C	T
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs107863296					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:101438421 () rs orientation: forward

Symbol	Name	Function Class
Prr30	proline rich 30	655 bp upstream
Tssr126900	transcription start site region 126900	1947 bp downstream
Tssr130024	transcription start site region 130024	1912 bp upstream
Tssr130025	transcription start site region 130025	662 bp upstream
Tssr130026	transcription start site region 130026	567 bp upstream