rs107868310 SNP Detail

Summary

• ID
  rs107868310
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:51343106 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T CTCATTCCAG TCCTCTAACA CCCCTTGAGA CCAATTCTGC
  CACTGTATTT AGAAGCTTTG AGTTAAAGGA TTTGACGACC ACAAAAAACC AAAACCAAAA
  A
  CAAAAACAAA AACCCAGTGG AAGATCTCAG ACAAAAATCC AACTGGACGG GCTACTCACA
  AAAGGTGTTA CCCACTTCGT TATATATACT TTCTGTTATT C                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss139474658	ENSMUSSNP1113900	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs107868310					SNP	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:51343106 () rs orientation: forward

Symbol	Name	Function Class
Rnase4	ribonuclease, RNase A family 4	within coordinates
Rr288976	regulatory region 288976	1706 bp distal
Rr288977	regulatory region 288977	506 bp distal
Rr295428	regulatory region 295428	520 bp proximal
Rr299307	regulatory region 299307	1915 bp distal
Tssr125402	transcription start site region 125402	760 bp downstream
Tssr125403	transcription start site region 125403	608 bp downstream
Tssr125404	transcription start site region 125404	468 bp downstream
Tssr125405	transcription start site region 125405	241 bp downstream
Tssr125406	transcription start site region 125406	164 bp downstream
Tssr128409	transcription start site region 128409	242 bp upstream
Tssr128410	transcription start site region 128410	222 bp upstream