rs107874657 SNP Detail

Summary

• ID
  rs107874657
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:134646419 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GGCCAGATGG TCTACAAAGT GAGTTCCAGG ACAGCCAGGG
  CTATACAGAA AAACCTTGTC TCAAAAACAA AAAACAAAAC AAAACAAAAA ACAAAAAAAA
  A
  CCAAAAAACA AACAAACAAA CAAACAAAAA GAACCCACCA AAAAAACAAA AACAAAAACA
  AAAACAAAAA AACCCAACAA AAAAACCCAA CAGCTTCGGT G                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss147538692	ENSMUSSNP3229731	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J
rs107874657					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:134646419 () rs orientation: forward

Symbol	Name	Function Class
Rr367743	regulatory region 367743	438 bp downstream
Rr398582	regulatory region 398582	1050 bp upstream
Tssr43946	transcription start site region 43946	693 bp upstream