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rs107875066 SNP Detail
Summary
  • ID
    rs107875066
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr8:124794875 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                          AGGGC AGGAAAGAAA ACACCTAACA
    Y
    CAATCAGAGG TCTTATATTC TCCAT                                      
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
DBA/2J
LG/J
SM/J
ss145839273 ENSMUSSNP5370588 ENSEMBL ENSEMBL_Sanger f SNP T T T
ss322856158 CHEV_8_126592036 CHEVERUD SCREENING_POP f SNP T C
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
DBA/2J
LG/J
SM/J
rs107875066 SNP T T T T C
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr8:124794875 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm29897 predicted gene, 29897 within coordinates
Rr672611 regulatory region 672611 891 bp distal
Rr672612 regulatory region 672612 1987 bp proximal
Tssr80018 transcription start site region 80018 1348 bp downstream
Tssr80019 transcription start site region 80019 1340 bp downstream
Tssr80020 transcription start site region 80020 997 bp downstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory