rs107878387 SNP Detail

Summary

• ID
  rs107878387
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:23005061 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T TACTGAGATA TTTTATAATT CTCAAAGACA AGGTATTGTA
  AAACTTTAAA AACTATGCCT TCTTTAAAAA CAAAGAAGGG GGGAGAGAAA TTATATCCCC
  R
  TGCACATTAT TTGGATCACA TATTTGTTTT GGAGAAACTG GATAGAATAG TGTCTAGGGC
  AGATAAAAAG GATCCACTTA TTGGCACATG CCATGATCCT G                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss148803486	ENSMUSSNP2562371	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs107878387					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:23005061 () rs orientation: forward

Symbol	Name	Function Class
Rr285916	regulatory region 285916	528 bp proximal
Rr285917	regulatory region 285917	1797 bp proximal