rs107879165 SNP Detail

Summary

• ID
  rs107879165
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:40829047 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TACAT TTGCTGAAAA TATGTGCCAC
  R
  CACTCCGGTC GAGTTAGCTT GGCAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325386002	CHEV_17_40655105	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs107879165					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:40829047 () rs orientation: forward

Symbol	Name	Function Class
Esp8	exocrine gland secreted peptide 8	1866 bp upstream
Gm49846	predicted gene, 49846	1346 bp downstream
Rr337560	regulatory region 337560	312 bp proximal
Rr392616	regulatory region 392616	within coordinates
Tssr144637	transcription start site region 144637	1863 bp upstream
Tssr144638	transcription start site region 144638	1874 bp upstream