rs107887952 SNP Detail

Summary

• ID
  rs107887952
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:6410162 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACTCTCATGG TCTTAGAACA GACAGAGATT TCCTAAGTGC
  AGTACAAGAG GGACTGATTA TAAACGGACC TCTCATATTG GACTATCTAG CAAAATGTCT
  R
  TGTGATATGG AGTCCTCTCT GTTACAAGTC ATTAAACAAT CTAGTTAAAA AAAATGAAGG
  AAAAATTCAA ACAGACACTT GACCAAAAGC AATAACCAG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss145085442	ENSMUSSNP5088302	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs107887952					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:6410162 () rs orientation: forward

Symbol	Name	Function Class
Gm2792	predicted gene 2792	1091 bp upstream
Gm29719	predicted gene, 29719	within coordinates
Gm65955	predicted gene, 65955	within coordinates