rs107888082 SNP Detail

Summary

• ID
  rs107888082
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:18791088 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GAAAGAGGAA CACTCCTCCA TTGCTGGTGG GATTGCAAGC
  TGGTACAACC ACTCTGGAAA TCAGTCTGGC AGTTCCTCAG AAAATTGGAC ATAGTACTAC
  T
  GGAGGATCCA GCAATACCTC TCCTGGGCAT ATATCCAGTA GAAGTTCCAA GTGGTAATAA
  GAACACATGC TCCACTATGT TCATAACAGC CTTATTTATA A                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss133041084	ENSMUSSNP6714215	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs107888082					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:18791088 () rs orientation: forward

Symbol	Name	Function Class
Gm43228	predicted gene 43228	1762 bp upstream