rs107891154 SNP Detail

Summary

• ID
  rs107891154
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:44130025 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTTT CCTTAGTCCT GTCTACCACT
  M
  CCTCTTCCTC CTCCTCTCCC ACTGT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss149112901	ENSMUSSNP5415026	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss322198944	CHEV_7_51735971	CHEVERUD	SCREENING_POP	f	SNP			C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs107891154					SNP	C	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:44130025 () rs orientation: forward

Symbol	Name	Function Class
Rr646103	regulatory region 646103	1983 bp proximal
Tssr2227	transcription start site region 2227	1581 bp downstream
Tssr2228	transcription start site region 2228	518 bp downstream
Tssr2229	transcription start site region 2229	243 bp downstream
Tssr2230	transcription start site region 2230	60 bp downstream
Tssr2231	transcription start site region 2231	65 bp upstream
Tssr2232	transcription start site region 2232	240 bp upstream
Tssr2233	transcription start site region 2233	273 bp upstream
Tssr2234	transcription start site region 2234	432 bp upstream
Tssr2235	transcription start site region 2235	1066 bp upstream
Tssr66282	transcription start site region 66282	1995 bp downstream
Tssr66283	transcription start site region 66283	1981 bp downstream
Tssr66284	transcription start site region 66284	1969 bp downstream
Tssr66285	transcription start site region 66285	1955 bp downstream
Tssr66286	transcription start site region 66286	1916 bp downstream
Tssr66287	transcription start site region 66287	1880 bp downstream
Tssr66288	transcription start site region 66288	1855 bp downstream
Tssr66289	transcription start site region 66289	1773 bp downstream
Tssr66290	transcription start site region 66290	1735 bp downstream
Tssr66291	transcription start site region 66291	1709 bp downstream
Tssr66292	transcription start site region 66292	1677 bp downstream
Tssr66293	transcription start site region 66293	1655 bp downstream
Tssr66294	transcription start site region 66294	1631 bp downstream
Tssr66295	transcription start site region 66295	1366 bp downstream
Tssr66296	transcription start site region 66296	1195 bp downstream
Tssr66297	transcription start site region 66297	1171 bp downstream
Tssr66298	transcription start site region 66298	1116 bp downstream
Tssr66299	transcription start site region 66299	1096 bp downstream
Tssr66300	transcription start site region 66300	1073 bp downstream
Tssr66301	transcription start site region 66301	1057 bp downstream
Tssr66302	transcription start site region 66302	1016 bp downstream
Tssr66303	transcription start site region 66303	1007 bp downstream
Tssr66304	transcription start site region 66304	1002 bp downstream
Tssr66305	transcription start site region 66305	963 bp downstream
Tssr66306	transcription start site region 66306	909 bp downstream
Tssr66307	transcription start site region 66307	860 bp downstream
Tssr66308	transcription start site region 66308	843 bp downstream
Tssr66309	transcription start site region 66309	793 bp downstream
Tssr66310	transcription start site region 66310	724 bp downstream
Tssr66311	transcription start site region 66311	701 bp downstream
Tssr66312	transcription start site region 66312	682 bp downstream
Tssr66313	transcription start site region 66313	672 bp downstream
Tssr66314	transcription start site region 66314	654 bp downstream
Tssr66315	transcription start site region 66315	647 bp downstream
Tssr66316	transcription start site region 66316	582 bp downstream
Tssr66317	transcription start site region 66317	566 bp downstream
Tssr66318	transcription start site region 66318	525 bp downstream
Tssr66319	transcription start site region 66319	497 bp downstream
Tssr66320	transcription start site region 66320	473 bp downstream
Tssr66321	transcription start site region 66321	449 bp downstream
Tssr66322	transcription start site region 66322	433 bp downstream
Tssr66323	transcription start site region 66323	395 bp downstream
Tssr66324	transcription start site region 66324	342 bp downstream
Tssr66325	transcription start site region 66325	301 bp downstream
Tssr66326	transcription start site region 66326	291 bp downstream
Tssr66327	transcription start site region 66327	271 bp downstream
Tssr66328	transcription start site region 66328	253 bp downstream
Tssr66329	transcription start site region 66329	214 bp downstream
Tssr66330	transcription start site region 66330	201 bp downstream
Tssr66331	transcription start site region 66331	187 bp downstream
Tssr66332	transcription start site region 66332	154 bp downstream
Tssr66333	transcription start site region 66333	119 bp downstream
Tssr66334	transcription start site region 66334	113 bp downstream
Tssr66335	transcription start site region 66335	102 bp downstream
Tssr66336	transcription start site region 66336	88 bp downstream
Tssr66337	transcription start site region 66337	72 bp downstream
Tssr66338	transcription start site region 66338	within coordinates
Tssr66339	transcription start site region 66339	26 bp upstream
Tssr66340	transcription start site region 66340	71 bp upstream
Tssr66341	transcription start site region 66341	116 bp upstream
Tssr66342	transcription start site region 66342	178 bp upstream
Tssr66343	transcription start site region 66343	210 bp upstream
Tssr66344	transcription start site region 66344	355 bp upstream
Tssr66345	transcription start site region 66345	388 bp upstream
Tssr66346	transcription start site region 66346	444 bp upstream
Tssr66347	transcription start site region 66347	482 bp upstream
Tssr66348	transcription start site region 66348	523 bp upstream
Tssr66349	transcription start site region 66349	547 bp upstream
Tssr66350	transcription start site region 66350	575 bp upstream
Tssr66351	transcription start site region 66351	583 bp upstream
Tssr66352	transcription start site region 66352	619 bp upstream
Tssr66353	transcription start site region 66353	693 bp upstream
Tssr66354	transcription start site region 66354	707 bp upstream
Tssr66355	transcription start site region 66355	734 bp upstream
Tssr66356	transcription start site region 66356	751 bp upstream
Tssr66357	transcription start site region 66357	765 bp upstream
Tssr66358	transcription start site region 66358	777 bp upstream
Tssr66359	transcription start site region 66359	803 bp upstream
Tssr66360	transcription start site region 66360	815 bp upstream
Tssr66361	transcription start site region 66361	841 bp upstream
Tssr66362	transcription start site region 66362	873 bp upstream
Tssr66363	transcription start site region 66363	890 bp upstream
Tssr66364	transcription start site region 66364	923 bp upstream
Tssr66365	transcription start site region 66365	943 bp upstream
Tssr66366	transcription start site region 66366	963 bp upstream
Tssr66367	transcription start site region 66367	991 bp upstream
Tssr66368	transcription start site region 66368	1013 bp upstream
Tssr66369	transcription start site region 66369	1047 bp upstream
Tssr66370	transcription start site region 66370	1089 bp upstream
Tssr66371	transcription start site region 66371	1514 bp upstream
Tssr66372	transcription start site region 66372	1677 bp upstream
Tssr66373	transcription start site region 66373	1967 bp upstream
Tssr72201	transcription start site region 72201	1650 bp upstream
Tssr72202	transcription start site region 72202	793 bp upstream
Tssr72203	transcription start site region 72203	413 bp upstream
Tssr72204	transcription start site region 72204	174 bp downstream