rs107893319 SNP Detail

Summary

• ID
  rs107893319
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrY:38625949 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GTGCTGCACT AATACACATA GATGAGAAAT ATATTTCTCT
  CTCTCTCTCT CTCTCTCTCT CTATTTCTCT CTCTCTCTCT CTATCTCTCT CTCCTTCTGT
  S
  TCTCATTTTT AAGGCATTCA TCCAGTAGTT GACATCTTAA ATCACTCCAT AGCATGTATG
  TTTCATACAG TGAGGCAATC AATATTGATG ATATGGATAT G                    
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss144887529	ENSMUSSNP141224	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs107893319					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrY:38625949 () rs orientation: forward

Symbol	Name	Function Class
Gm58079	predicted gene, 58079	1211 bp upstream