rs107895442 SNP Detail

Summary

• ID
  rs107895442
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:182820746 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GGATAACCCC TTGGGTTATC AGGCTGAGCC ACAAGCACCT
  TTACCTGCTG AGCCTTCTCT CTGACCCCGT TCTTCATCCT TCAGTGATGA TAAGGTCAGC
  W
  CTGCAGAGCA CTGGTTGGTT TGAGTGCCAC CCCTGAAACT GCACAGGGAG GCCTGTCCCT
  CCTCAACAGC AGGATGGCCC GAGTCTTCAT CACTGACCCG T                    
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss136165878	ENSMUSSNP727825	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs107895442					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:182820746 () rs orientation: forward

Symbol	Name	Function Class
Rr425028	regulatory region 425028	1351 bp distal
Rr425029	regulatory region 425029	1953 bp distal
Rr425030	regulatory region 425030	863 bp distal
Rr425031	regulatory region 425031	1720 bp proximal