rs107905039 SNP Detail

Summary

• ID
  rs107905039
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:70119477 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGCTTAAGC AAGGGAAGGC
  TTCTGTACAG CTGCGCTAAT TGGAGCTGTG TGAACCTGAG TGAAGATGGC TCGCGAGTGG
  CTAGGCCACG CCTTCAGCTT CCCTTGTTAC CCCTTCATCC CCTGTTTCAG TGAAATGCTC
  CGGGACCCAA GGTTCCGCAG TGCAGGAACT CAAGGGCTAT CGCCAGAGTT ATCAGTAAGG
  S
  TAGAGAGCAA GCACCTGCGA GCGTTTTTTT GGTGGCCACA GATTCCCCTC TCGGCTTCTG
  GTGTGTCGTG AAGTCACGTT AGACTACGTG GAAGCGTGCT TCTCGTCCGC TGGTGAGAGG
  GGACTTGGGT CCCACTGCCT GGAAAGAACA CGTGAAAGCT TTTCGCCATC ATCTCTGTTC
  ATCTCCAACA CACCCAGGCT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss136604762	ENSMUSSNP2482937	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs107905039					SNP	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:70119477 () rs orientation: forward

Symbol	Name	Function Class
Gm26849	predicted gene, 26849	within coordinates
Gm68934	predicted gene, 68934	426 bp upstream
Myo1e	myosin IE	within coordinates
Tssr85881	transcription start site region 85881	1016 bp upstream
Tssr90403	transcription start site region 90403	451 bp upstream