rs107905551 SNP Detail

Summary

• ID
  rs107905551
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr15:39297142 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATTTTTTTA GATCAATAAT
  GGACAATTGA TTGAACTGCA CTGACACGCA TTATTAGACT CTTCTTTACA CTTGATGACT
  TGGAAACTAA AAAAATAATA ATATACTGCT TGCTGTCTCT TTGCTCATAT CTCAAAAATT
  GCATCATATA TATGTGTGTG TATGTGTATA TATGAACATA TTATAAAAAT ATATGATTAT
  R
  AGAATACATA TTCATTTTTA TATAAGTTAT TTGAAATGAC TTAGATACAG GTTTTCAAAA
  AATAATGTTA ACTTTCAGAT AATTTGGGAT TTCATTATAA TTGGGTTTTG AAACTTTACA
  GTTTTTATCT TCAAGCCATG AGCTGGAGAT GTTGACATAT TGTATTAAAT GAGTCAAACT
  GGATTTATGC TCAGTATTTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147663818	ENSMUSSNP5299106	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs107905551					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:39297142 () rs orientation: forward

Symbol	Name	Function Class
Rims2	regulating synaptic membrane exocytosis 2	Intron
Tssr131153	transcription start site region 131153	551 bp upstream
Tssr131154	transcription start site region 131154	577 bp upstream
Tssr131155	transcription start site region 131155	605 bp upstream
Tssr131156	transcription start site region 131156	821 bp upstream