rs107910214 SNP Detail

Summary

• ID
  rs107910214
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:52938047 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTATTCCCT CATCATATTA
  CTTATAGCAA ATATTTGATT AAAATCTAAT TTATGAAAAA GCCACTCTCT GGCCCTTGTC
  CTGATCCCAG TGCTTGGCTG CTAGGGTTTA CAACAACACT GGAGGACACC AATAAAGCTC
  TACTAAGGCC ACAGAAGACG TCTCATGAGT AGGCTAGGTA CAGAAAACAC AGAGGTCGGC
  M
  CTTTAGACGC CTCTCCACGT AGGTGAGACA GAGGGATTAC AGGCCCAGGG GATTCTGATA
  TAGAAAGCAA GTGAGACTCA CAAACAATCT ATTCTTAACC CACACAAAAT CTTTTAGCGG
  CTATTTTTTA ACAAGATACT TTCCTTAGCG CTACAAAAGC CCTGCTCTGG GGTCCAGGCC
  AGTGACTGAG TTATCCTTAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss133191936	ENSMUSSNP5813901	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs107910214					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:52938047 () rs orientation: forward

Symbol	Name	Function Class
Jazf1	JAZF zinc finger 1	within coordinates
Rr630519	regulatory region 630519	646 bp proximal
Tssr61049	transcription start site region 61049	661 bp downstream