rs107916131 SNP Detail

Summary

• ID
  rs107916131
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:22700712 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGGTAGGAT AATGGCTGCT
  CTGACTTGAT TCAAAACCAT GGCAGCATTT ACTAAGTAAA CAACAATGAA GACTGCATTC
  AAACTGAATT AAATGTGTGA AGTTAATCTA AGTATATGTC CTGTTGAACA TATATATATA
  AACATAGTAC TTGGATTTTC AAATATATGT AATTGAAGTT TATTTATGTG AAAAAGAAAA
  R
  GTCTTTGGGG TCAATACCTG AAGCTTGAGT TTGAAGCTGA AGAGATAGTT GAGCATTAGG
  AAAATTCCAT GGCCACTGAG AAACGTCAGT TTAGCCTGAA TGTGCCCCTC CTCCAGCACA
  CCCTTCTTTC TCCAGGAGAG AAGAATAGTA TAACTCTGGT AAAGTACTAC TCCAGTTTTC
  CTTTAACCAA CAATGTGATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss146365993	ENSMUSSNP1938310	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs107916131					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:22700712 () rs orientation: forward

Symbol	Name	Function Class
Apbb1ip	amyloid beta precursor protein binding family B member 1 interacting protein	within coordinates
Rr48488	regulatory region 48488	1312 bp distal
Rr48489	regulatory region 48489	within coordinates
Rr48490	regulatory region 48490	889 bp proximal
Rr372905	regulatory region 372905	15 bp upstream