rs107916433 SNP Detail

Summary

• ID
  rs107916433
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:158255211 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G AGACCGGGTT TCTCTGTATA GCCCTGGCTG TCCTGGAATT
  CACTGTGTAG ACCAGGCTGG CCTCGAACTC AGAAATCCGC CTGCCTCTGC CTCCCAAATG
  M
  TGGGATTAAA GGCGTCAGCT ACCACACCCA GCTTTATTGT TACATATATG TATATACATT
  TATATGTGTG TATATGACTA TGAATATGAA TATACTAATA T                    
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss134519804	ENSMUSSNP666348	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs107916433					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:158255211 () rs orientation: forward

Symbol	Name	Function Class
Map7d2	MAP7 domain containing 2	within coordinates
Tssr162488	transcription start site region 162488	625 bp upstream
Tssr162489	transcription start site region 162489	652 bp upstream