rs107917256 SNP Detail

Summary

• ID
  rs107917256
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:78134556 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTTCCCAGCC TCAGTGAGGT GCCAGGCATG GACAGTGTTC
  AGAATGGGGT GTGCAGGCCT CCATCAGCTG GCTGTGTCCA GAGCAGGCAA GGTGGTAACC
  R
  ATCCCCTCCC TCTGGCCTCC TACAGCGACT TTGAGCAGCT TCCAGACGAT GTGGCCGTCT
  CAGCCAACAT CGCTGACATC GAGGAGAAGA GGGGCTTCA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss148180810	ENSMUSSNP3961698	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs107917256					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:78134556 () rs orientation: forward

Symbol	Name	Function Class
Ncf4	neutrophil cytosolic factor 4	within coordinates
Rr505231	regulatory region 505231	1485 bp distal
Rr505232	regulatory region 505232	1453 bp proximal
Rr505233	regulatory region 505233	1561 bp proximal
Tssr131902	transcription start site region 131902	259 bp upstream
Tssr131903	transcription start site region 131903	532 bp upstream