rs107919313 SNP Detail

Summary

• ID
  rs107919313
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:11189137 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGGCCACA GAATGTGTTA
  TAATATTCAC AAATCGCAAA CCAGTCCACA TCTTAAGCCA TGACACAGTT ATCTAACCTG
  AGTGTTGGAT GACTGATATG ATGCATGGTG GCACATACAT GCTGAGCAGG GCATCAGAGG
  AGCTGGATCT GGGCTCAGGA CAAGATGTCT GGGTTGTGAC TACACATACA CATACACACA
  Y
  ACACACTCAC AAATGATAAA TACTTATAAT TATAAATGGC ATGTACCATT GTGGCACAAA
  AGATCAGTAT ACAAAAGTCA ATTGTATTTC TTTTTTTTTT TTTTTTTTTT TTTTTGGGTG
  CAGCGAACTT TATTGATGGT ATTCAAGAGA GTAGGGAGGG CTCCCTAGGC CCCTCCTGTT
  ATTATGGGGG TCTGGGATGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss139024268	ENSMUSSNP1670054	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs107919313					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:11189137 () rs orientation: forward

Symbol	Name	Function Class
Gapdhrt	glyceraldehyde-3-phosphate dehydrogenase, retrotransposed	115 bp downstream
Mir5124b	microRNA 5124b	1841 bp upstream