rs107919470 SNP Detail

Summary

• ID
  rs107919470
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:119356611 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GACAG GGTTTCTCTG TGTAGCCCTG
  R
  CTGTCCTGGA ACTCACTCTG TAGAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss147334686	ENSMUSSNP1011868	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss320475892	CHEV_2_119351866	CHEVERUD	SCREENING_POP	f	SNP		A	G
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs107919470					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:119356611 () rs orientation: forward

Symbol	Name	Function Class
D2Dcr64	DNA Segment, Chr 2, Derry C. Roopenian 64	1096 bp distal
D2Mit395	DNA segment, Chr 2, Massachusetts Institute of Technology 395	1093 bp distal
Exd1	exonuclease 3'-5' domain containing 1	Intron
Rr563524	regulatory region 563524	366 bp distal