rs107926965 SNP Detail

Summary

• ID
  rs107926965
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:45027997 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGAAGGTTT AGTGAGGTGG
  GGCTGTGTTT CACACAGGAG CACAGGCAAA GCGAAGAGGT CAGCCACATG CTAGGCTGTT
  AAACTAGGTA TAGATAACAG GTTGGACTAC TGCAAAGCAG GACCCAGACT TCCAGCTGCT
  GGATCACAGT CTAACAATGA GCTAGGCCAT TATCAATACA AGAAAATGTC TATAGTAAGA
  R
  TTCTGTAATT TGGGTTGCTT AAAAAAAACA AAACAAAACA AACAAACAAA AAAAACAGGA
  AACAGCTGCG CAGTGGTGGC GCACGCCTTT AATCCCAGCA CTCGGGAGGC AGAGGCAGGC
  AGATTTCTGA GGCCAGCCTG GTCTACAGAG TGAGTTCCAG GACAGCCAGG CTACATAGAG
  AAACCCTATC TCGAAAAAAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss149134251	ENSMUSSNP1240258	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs107926965					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:45027997 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Snrnp70	small nuclear ribonucleoprotein 70 (U1)			Intron
				Noncoding-Transcript-Variant
Tssr66520	transcription start site region 66520			1376 bp downstream