rs107928085 SNP Detail

Summary

• ID
  rs107928085
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:144053278 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTGC AGCCTAAAGG AAAATCCCTT
  W
  AAAAAAAAAA AGACCTGAAT ACAAA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	LG/J	SM/J
ss145634687	ENSMUSSNP5483335	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss320011873	CHEV_1_146024670	CHEVERUD	SCREENING_POP	f	SNP		T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	LG/J	SM/J
rs107928085					SNP	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:144053278 () rs orientation: forward

Symbol	Name	Function Class
Rgs13	regulator of G-protein signaling 13	168 bp upstream
Rr396359	regulatory region 396359	within coordinates
Rr396360	regulatory region 396360	699 bp upstream
Tssr14103	transcription start site region 14103	344 bp upstream
Tssr14104	transcription start site region 14104	259 bp upstream