rs107930197 SNP Detail

Summary

• ID
  rs107930197
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:24933265 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTAGAAGCC TCAAAATGTC
  ATGAAAAACA CCATGTTAAA AGTAAAGATT TAGCTAGGCA GTGGTGGTGC ATGCCTTTAA
  TCCTAGCACT TGGGAGGTAG AGACAGGTGG ATTTCTTTGT AGGCCAGCCT GGTCTACAGA
  GTGAGTTCCA GGACAGCTAG GGCTACACAG AGAAACCCTA TCTCAAAAAA CCAAAAAAAA
  G
  AAAAAAAAAA AAAAGAAAAG AAAAAAATTC TACCACCTGG CAACAAGACA AGGACATGAT
  AAAGAAATGT CCTGCTTGGC CTCTGTATAA TCAAACTCCA TTACCCACTG GAAGTGACCC
  TAGGGGCACC AAAGGAAATG AAATCTGGCA GATGGATGTG TTTTATTTTG CAGAATTTGG
  AAAAGTTTGT ACACTGTACC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	C57BL/10SnJ	CBA/J	CZECHII/EiJ	JF1/MsJ	MOLF/EiJ	NZW/LacJ	PL/J	PWK/PhJ	ST/bJ
ss397861484	MGP_WTSI_17_24851236	EVA_MGPV3	EVA_MGPV3	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	C57BL/10SnJ	CBA/J	CZECHII/EiJ	JF1/MsJ	MOLF/EiJ	NZW/LacJ	PL/J	PWK/PhJ	ST/bJ
rs107930197					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss397861484	MGP_WTSI_17_24851236	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:24933265 () rs orientation: forward

Symbol	Name	Function Class
Rnf151	ring finger protein 151	1548 bp downstream
Rr329803	regulatory region 329803	865 bp distal