rs107945117 SNP Detail

Summary

• ID
  rs107945117
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:22700299 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAGACACAG TGGGCACAGA
  GCTCCTCCAC TCGCTCATGG TCAGCCATGG AAGGTATTTT AAGCAGGAAT GTGACAAGTT
  CATGACTGTG TTTGAATTCA GTGCTTATGC TGTCATTGAG GACAGGAAGT CAGGGTGACT
  GGAAGCTGGA CGAGCAGATA GATGAAGCTT TCAGCTATGG CCACGCAGTA AGAATGAGAG
  R
  AGAAAACATC CACTGGAAAA TCCAACAGGA TTTTCTGACT CGCCAGGTGG GAAAATGGAA
  GAGAAGAGGA TCATACCAAC TTCTAACTCA GACTAATGAG TGACAAATGG TCACCCGCCA
  AACCTGGAGT GTTGGGGTTG CAGAAGAAGA AATAGTGAGT GGGAGCAGTT TGCATGGAAA
  TGCCCGAGGG TCTTTAAAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss146365984	ENSMUSSNP74830	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs107945117					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:22700299 () rs orientation: forward

Symbol	Name	Function Class
Apbb1ip	amyloid beta precursor protein binding family B member 1 interacting protein	within coordinates
Rr48488	regulatory region 48488	899 bp distal
Rr48489	regulatory region 48489	within coordinates
Rr48490	regulatory region 48490	1302 bp proximal
Rr60642	regulatory region 60642	1699 bp distal
Rr372905	regulatory region 372905	428 bp upstream