rs107952391 SNP Detail

Summary

• ID
  rs107952391
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:27994958 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGGCCTTT CTAGTTTGAA
  ATAAGACTAG AGTGAAATTG CAGTCGACGC CCTTGCTGCT CTGTGACTTG GACCTTTGAC
  TCTCCTTGAC AGAATCCCAC CATGATGCCA AACAAGGAAA TAACTCAATG AGAGCTCAGT
  CAGAGACTCC TCAAGCAGCA ACTGGGATGG CGCTCACTGA GTGAGGCTGT GCCTCATAAG
  R
  ACTTCTTTTA AATCCCCGAG CCAAGAAGAG ACTCGAAATG CCTCCTCAGA AGCCAGTTAG
  ACTGATGCAT AGTGAGGACA GACTGCCCAC AGTGAGGACA GGCTGATACC CACGGAGAGG
  ACAGACAGAC TGATGCCCAC AGAGAGGACA AAGGCACCAT TTCAAACTAG GTGGAGGGCA
  AGAGCTGACA CCCATGGTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325349527	CHEV_17_27912929	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs107952391					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:27994958 () rs orientation: forward

Symbol	Name	Function Class
Ilrun	inflammation and lipid regulator with UBA-like and NBR1-like domains	within coordinates
Rr340954	regulatory region 340954	643 bp proximal
Tssr147065	transcription start site region 147065	1953 bp downstream