rs107957094 SNP Detail

Summary

• ID
  rs107957094
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr17:66077842 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCATT CAGTACCAGT TCTCTGCCTT
  Y
  GAAGAGAAGG GAATGAATGA TATGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325427999	CHEV_17_66120187	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs107957094					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:66077842 () rs orientation: forward

Symbol	Name	Function Class
Cpgi9418	CpG island 9418	1128 bp proximal
Rab31	RAB31, member RAS oncogene family	Intron
Rr529806	regulatory region 529806	1810 bp distal
Rr529807	regulatory region 529807	207 bp proximal
Rr529808	regulatory region 529808	1685 bp proximal
Rr529809	regulatory region 529809	1783 bp proximal
Tssr149074	transcription start site region 149074	1788 bp downstream
Tssr149075	transcription start site region 149075	1818 bp downstream
Tssr149076	transcription start site region 149076	1839 bp downstream