rs107962335 SNP Detail

Summary

• ID
  rs107962335
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:101206901 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCATTTCAGC CCTCTTCCTC
  GGTAAACTTG TAACCAGAGC AGGTAACAGT GAGCAAACGG ATAGGCTTGA AGTTCATCTT
  CTTTTGTTTT CCTTGCTCAT TCTCTGGAAA AGGGGCTAAC GAGCAGTAAA ATGACCAGGC
  ACAGGATTCC AGAAGAGACG AGAGAGAGGG CCTGCCTGGG GAGCTGGCTG TGTAACCATC
  R
  CATAATTGGC TCTTGAATTA TCACAAGGTG CCCTACCATT TTATGATGCT GTCTGAGTTT
  TCCAGGTTCC AACGTTGATG GGGAATAAGG AGGAGATGGT GTTGCAGTTG GCACAGTGCT
  TGCTTCGTCC GCTGGGCTGG AAAGGTGTCT CCAGAGAAGG TTCTTTATAG AAAACATTTG
  AAAACAAATG TTGATTGGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
ss136865409	ENSMUSSNP4150599	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A		G
ss323149622	CHEV_9_101232032	CHEVERUD	SCREENING_POP	f	SNP				G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
rs107962335					SNP	A	A	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:101206901 () rs orientation: forward

Symbol	Name	Function Class
Rr198413	regulatory region 198413	101 bp distal