rs107962915 SNP Detail

Summary

• ID
  rs107962915
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:67188088 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACTGTCTAT GTGTCTTAAT
  GAATCTACAG GAAGCAGACA GCTTGGCCGA TGCTGAGGAA AGGTGTGAAC AATTGATCAA
  AAACAAAATC CAGCTGGAGG CCAAAATCAA AGAGGTGACC GAGAGGGCCG AGGACGAGGA
  GGAGATCAAC GCGGAGCTCA CGGCCAAGAA GAGGAAGCTG GAGGACGAGT GCTCAGAGCT
  R
  AAGAAGGACA TCGATGACCT TGAGCTGACA CTGGCCAAGG TTGAGAAGGA GAAGCACGCC
  ACGGAGAACA AGGTATGAGA CGTCTACACG GGAAGCTTAT GACTCATTTT AATGAAGAAG
  TAAGACATAA AACCAAAGCT ATTAAGACCT AACGTTTAAT GCAAAGCACG TTTGCTTCCC
  AAGGTGAAAA ACCTGACAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss132327357	ENSMUSSNP6991790	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs107962915					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:67188088 () rs orientation: forward

Symbol	Name	Function Class
Cpgi3068	CpG island 3068	1209 bp proximal
Myh8	myosin, heavy polypeptide 8, skeletal muscle, perinatal	within coordinates
Tssr102227	transcription start site region 102227	1203 bp upstream
Tssr108547	transcription start site region 108547	481 bp downstream
Tssr108548	transcription start site region 108548	1234 bp downstream